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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14020546_14022003_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14020546 - 14022003

Intron Length:
1458

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTATTGTTC

5'SS Class:
major

3'SS Sequence:
CCTTTTATCTTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAT

U12 Branch Point Sequence:
TCCCCTTTTATC

Flanking Amino Acid:
AFALGTVKCLVMDVQAFERL

Intron Amino Acid Position:
397

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
68.4
37.2

Major BPS
84.1
0.85
0.9
75.3
39.4

Major PPT
78.1
0.63
0.8
77.4
29.8

Minor 5ss
47.4
-0.2
3
67.5
43.9

Minor BPS
51.7
0.04
1.6
59.23
40.5

Associated Gene:

Gene:
PRKAR2B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13941786 - 14022137
80352

13941786 - 14022137
80352