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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140307132_140307961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140307132 - 140307961

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATGTCAT

5'SS Class:

major

3'SS Sequence:

TTTTAATTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

PPFEENTGTDTNQQPPTLPE

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

64.7

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

73.3

40.8

Minor 5ss

44.2

-0.6

2.9

63.9

41.5

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

LNX2

Ensembl Gene ID:

ENSAPLG00000005445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038736

140292699 - 140332734

40036

ENSAPLT00000030310

140292699 - 140320577

27879

ENSAPLT00000005629

140292699 - 140327724

35026