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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14034545_14035682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14034545 - 14035682

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAATGAC

5'SS Class:

major

3'SS Sequence:

CCTTTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

GTATGTATAATT

Flanking Amino Acid:

YASCDEHMELDDLPELQAVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

69.5

35.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

85.1

0.79

0.8

79.6

32.3

Minor 5ss

32.8

-2

3.3

43.7

44.2

Minor BPS

49.3

0.03

70.33

40.9

Associated Gene:

Gene:

HBP1

Ensembl Gene ID:

ENSAPLG00000007110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021052

14033995 - 14047361

13367

ENSAPLT00000007396

14030705 - 14047361

16657