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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140350165_140357816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140350165 - 140357816

Intron Length:

7652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTCTTCTCATGT

Flanking Amino Acid:

EEEEEDPELERKAVEELLKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.8

0.56

0.9

73.9

35.8

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

45.5

-0.2

2.1

62.9

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006186

140350130 - 140364397

14268