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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140357892_140363733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140357892 - 140363733

Intron Length:

5842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTACTCTTAAAT

Flanking Amino Acid:

TRAETMGAMGWLKCPLAGAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.1

0.61

0.9

69.4

40.9

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

71.4

0.75

1.3

83.73

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006186

140350130 - 140364397

14268