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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14038342_14038667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14038342 - 14038667

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGTT

5'SS Class:

major

3'SS Sequence:

TGCATGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

AAATTCTGACCT

Flanking Amino Acid:

EENGSASAYKGYGSDGLKLI

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

76.2

39.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

75.3

0.57

67.9

42.3

Minor 5ss

42.8

-0.8

3.6

66.4

45.1

Minor BPS

52.3

0.15

1.7

69.28

41.1

Associated Gene:

Gene:

HBP1

Ensembl Gene ID:

ENSAPLG00000007110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021052

14033995 - 14047361

13367

ENSAPLT00000007396

14030705 - 14047361

16657