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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14038825_14039393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14038825 - 14039393

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTACCACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TCTAATTTAACT

Flanking Amino Acid:

LDHPFYVKNKGWSSFYPSLT

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.7

35.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

78.8

0.65

0.9

75.2

34.3

Minor 5ss

47.1

-0.3

2.6

65.5

45.8

Minor BPS

67.8

0.64

1.5

81.56

Associated Gene:

Gene:

HBP1

Ensembl Gene ID:

ENSAPLG00000007110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021052

14033995 - 14047361

13367

ENSAPLT00000007396

14030705 - 14047361

16657