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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140406033_140406468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140406033 - 140406468

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

CTCGGCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GGGTCCTGACCG

Flanking Amino Acid:

DPRQFHCISVDSTSSQLPSS

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.7

46.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

68.1

0.41

0.9

35.1

Minor 5ss

28.2

-2.5

3.4

29.1

43.5

Minor BPS

49.1

-0.2

1.9

46.3

Associated Gene:

Gene:

GSX1

Ensembl Gene ID:

ENSAPLG00000024317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040592

140404857 - 140407034

2178