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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14042206_14045391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14042206 - 14045391

Intron Length:

3186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

CTGTCCTGACCA

Flanking Amino Acid:

YTQMYPGKDNRAISVILGDR

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

34.9

Major BPS

0.27

1.1

69.2

36.3

Major PPT

87.1

0.83

0.7

81.6

29.6

Minor 5ss

32.9

-2

3.6

46.7

48.6

Minor BPS

57.1

0.22

1.8

67.89

44.5

Associated Gene:

Gene:

HBP1

Ensembl Gene ID:

ENSAPLG00000007110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021052

14033995 - 14047361

13367

ENSAPLT00000007396

14030705 - 14047361

16657