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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14045534_14047209_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14045534 - 14047209

Intron Length:

1676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTATGTTCT

5'SS Class:

weak_major

3'SS Sequence:

TCTCCGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

AACTGCTGACTT

Flanking Amino Acid:

DCWKRKRTNSGSQQH*

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.1

67.4

38.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

78.6

0.64

0.8

32.5

Minor 5ss

56.5

0.22

2.3

77.7

36.7

Minor BPS

44.7

-0.3

2.1

60.03

43.8

Associated Gene:

Gene:

HBP1

Ensembl Gene ID:

ENSAPLG00000007110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021052

14033995 - 14047361

13367

ENSAPLT00000007396

14030705 - 14047361

16657