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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_140474448_140474529_R

Intron Information:

Intron Rank:
21
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
140474448 - 140474529
Intron Length:
82

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTATGTTCT
5'SS Class:
major
3'SS Sequence:
ATTGTGTTCCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAG
U12 Branch Point Sequence:
GTATTCTCCATT
Flanking Amino Acid:
GILLWEIFSLGVNPYPGIQV
Intron Amino Acid Position:
912

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.5
0.7
1
74.1
37.2
Major BPS
67.4
0.43
1.5
65.3
43.7
Major PPT
74.8
0.56
1
65.6
44.9
Minor 5ss
48.5
-0.1
2.4
59.5
45
Minor BPS
48.9
-0
1.9
69.39
41.8

Associated Gene:

Gene:
FLT3
Ensembl Gene ID:
ENSAPLG00000005989
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041730
140472130 - 140516164
44035
ENSAPLT00000037706
140472130 - 140516164
44035
ENSAPLT00000006238
140472130 - 140516164
44035