Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_140474642_140475285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140474642 - 140475285

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

ATGGCATGACCT

Flanking Amino Acid:

NDSNYIVRGNARLPVKWMAP

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

77.9

30.9

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

73.9

0.54

67.7

37.8

Minor 5ss

43.9

-0.7

2.7

58.7

38.8

Minor BPS

45.2

-0.2

64.36

45.6

Associated Gene:

Gene:

FLT3

Ensembl Gene ID:

ENSAPLG00000005989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041730

140472130 - 140516164

44035

ENSAPLT00000037706

140472130 - 140516164

44035

ENSAPLT00000006238

140472130 - 140516164

44035