About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_140499889_140500802_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
140499889 - 140500802

Intron Length:
914

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGCAT

5'SS Class:
major

3'SS Sequence:
CTTTTAATTGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
GTGCTTTTAATT

Flanking Amino Acid:
QWMFCKTPDRSCLNKVHEGN

Intron Amino Acid Position:
206

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.6
0.49
1.1
63.1
42.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
84
0.76
0.8
78.3
33.7

Minor 5ss
30.7
-2.2
3.6
46.8
48.5

Minor BPS
64.7
0.54
1.2
73.32
38.1

Associated Gene:

Gene:
FLT3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

140472130 - 140516164
44035

140472130 - 140516164
44035

140472130 - 140516164
44035