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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140523314_140528921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140523314 - 140528921

Intron Length:

5608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGATTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TATTAGATAACT

Flanking Amino Acid:

GGGLDGPRLASITVGVGLQE

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

56.9

42.6

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

81.4

0.71

0.8

77.4

36.7

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

49.6

0.05

2.4

79.56

41.7

Associated Gene:

Gene:

PAN3

Ensembl Gene ID:

ENSAPLG00000006496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025572

140522860 - 140602665

79806

ENSAPLT00000020891

140522860 - 140602665

79806

ENSAPLT00000037790

140522860 - 140603660

80801

ENSAPLT00000019882

140522860 - 140602665

79806

ENSAPLT00000036610

140522723 - 140602665

79943

ENSAPLT00000018760

140522723 - 140603122

80400

ENSAPLT00000026849

140522860 - 140599939

77080