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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140535983_140545298_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140535983 - 140545298

Intron Length:

9316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

TTTATTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

PAETKYPMMQRMTNSSSSPS

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.5

0.96

0.7

88.4

28.6

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

PAN3

Ensembl Gene ID:

ENSAPLG00000006496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019882

140522860 - 140602665

79806

ENSAPLT00000036610

140522723 - 140602665

79943

ENSAPLT00000018760

140522723 - 140603122

80400

ENSAPLT00000026849

140522860 - 140599939

77080

ENSAPLT00000006749

140522860 - 140602665

79806

ENSAPLT00000025572

140522860 - 140602665

79806

ENSAPLT00000020891

140522860 - 140602665

79806

ENSAPLT00000037790

140522860 - 140603660

80801