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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140545366_140547092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140545366 - 140547092

Intron Length:

1727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTCTTTTTACA

Flanking Amino Acid:

NDSAKQYAGHDPLTSPNSSL

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

89.2

0.88

0.7

30.3

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

58.8

0.27

1.6

70.37

35.1

Associated Gene:

Gene:

PAN3

Ensembl Gene ID:

ENSAPLG00000006496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020891

140522860 - 140602665

79806

ENSAPLT00000037790

140522860 - 140603660

80801

ENSAPLT00000019882

140522860 - 140602665

79806

ENSAPLT00000036610

140522723 - 140602665

79943

ENSAPLT00000018760

140522723 - 140603122

80400

ENSAPLT00000026849

140522860 - 140599939

77080

ENSAPLT00000006749

140522860 - 140602665

79806

ENSAPLT00000025572

140522860 - 140602665

79806