Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14057338_14057946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14057338 - 14057946

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAAATC

5'SS Class:

major

3'SS Sequence:

GTGAACGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TGCTCTGTGAAC

Flanking Amino Acid:

PSEKDRLALIRASTWILWMQ

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

72.6

36.9

Major BPS

66.1

0.4

31.5

Major PPT

63.1

0.3

1.1

53.6

45.5

Minor 5ss

37.9

-1.4

3.2

53.2

43.8

Minor BPS

46.7

-0.2

2.1

58.98

40.5

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985