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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140577706_140587830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140577706 - 140587830

Intron Length:

10125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGTTTGTTGATG

Flanking Amino Acid:

ADAYFTKRKWGQHDGPLPRQ

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.8

0.87

0.7

81.3

30.7

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

50.3

-0.1

2.1

62.23

40.4

Associated Gene:

Gene:

PAN3

Ensembl Gene ID:

ENSAPLG00000006496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019882

140522860 - 140602665

79806

ENSAPLT00000036610

140522723 - 140602665

79943

ENSAPLT00000018760

140522723 - 140603122

80400

ENSAPLT00000026849

140522860 - 140599939

77080

ENSAPLT00000006749

140522860 - 140602665

79806

ENSAPLT00000025572

140522860 - 140602665

79806

ENSAPLT00000046164

140549888 - 140602665

52778

ENSAPLT00000020891

140522860 - 140602665

79806

ENSAPLT00000037790

140522860 - 140603660

80801