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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14059270_14067561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14059270 - 14067561

Intron Length:

8292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCTA

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TCTAACTCAAAT

Flanking Amino Acid:

KMRLAADFAQMELAVAPLCR

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

46.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

88.1

0.86

0.7

84.2

30.9

Minor 5ss

45.9

-0.4

3.2

65.3

45.9

Minor BPS

50.3

0.09

1.9

71.8

44.2

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312