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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140594445_140595369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140594445 - 140595369

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

GATATTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

GTTTAAGTAATC

Flanking Amino Acid:

NYSSDLKNLILYLLTDQNRL

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

73.5

37.9

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

69.9

0.45

1.1

65.6

Minor 5ss

46.4

-0.4

2.8

64.2

41.3

Minor BPS

46.6

-0.2

2.3

65.43

Associated Gene:

Gene:

PAN3

Ensembl Gene ID:

ENSAPLG00000006496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018760

140522723 - 140603122

80400

ENSAPLT00000026849

140522860 - 140599939

77080

ENSAPLT00000006749

140522860 - 140602665

79806

ENSAPLT00000025572

140522860 - 140602665

79806

ENSAPLT00000046164

140549888 - 140602665

52778

ENSAPLT00000020891

140522860 - 140602665

79806

ENSAPLT00000037790

140522860 - 140603660

80801

ENSAPLT00000019882

140522860 - 140602665

79806

ENSAPLT00000036610

140522723 - 140602665

79943