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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140598521_140599256_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140598521 - 140599256

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

TGTTTTATACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGAGTTTTAATC

Flanking Amino Acid:

AKLGTINERPEFQKDPTWSE

Intron Amino Acid Position:

824

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

74.4

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.8

0.63

71.5

42.8

Minor 5ss

36.4

-1.5

3.1

46.1

42.9

Minor BPS

59.4

0.28

1.3

62.91

37.1

Associated Gene:

Gene:

PAN3

Ensembl Gene ID:

ENSAPLG00000006496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018760

140522723 - 140603122

80400

ENSAPLT00000026849

140522860 - 140599939

77080

ENSAPLT00000006749

140522860 - 140602665

79806

ENSAPLT00000025572

140522860 - 140602665

79806

ENSAPLT00000046164

140549888 - 140602665

52778

ENSAPLT00000020891

140522860 - 140602665

79806

ENSAPLT00000037790

140522860 - 140603660

80801

ENSAPLT00000019882

140522860 - 140602665

79806

ENSAPLT00000036610

140522723 - 140602665

79943