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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140635359_140640537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140635359 - 140640537

Intron Length:

5179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTTTTCTAAAAT

Flanking Amino Acid:

VESSAYVTVQGTPERSNLEL

Intron Amino Acid Position:

740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

80.2

0.68

0.9

72.9

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

62.6

0.47

1.8

80.39

41.7

Associated Gene:

Gene:

FLT1

Ensembl Gene ID:

ENSAPLG00000006689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027530

140607629 - 140714774

107146

ENSAPLT00000007133

140608728 - 140714774

106047