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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140642600_140647578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140642600 - 140647578

Intron Length:

4979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTCGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

GAATGTAAAACA

Flanking Amino Acid:

VLQKKDVTIRAQEAPALLRQ

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

87.7

0.85

0.6

85.2

22.3

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

41.5

-0.6

2.1

50.97

40.2

Associated Gene:

Gene:

FLT1

Ensembl Gene ID:

ENSAPLG00000006689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027530

140607629 - 140714774

107146

ENSAPLT00000007133

140608728 - 140714774

106047