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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14067800_14069244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14067800 - 14069244

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATACC

5'SS Class:

major

3'SS Sequence:

TCTTTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

IITMHQEDFSGSLSSSGKPD

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

72.1

37.7

Major BPS

0.37

1.3

76.1

Major PPT

85.4

0.8

0.9

83.9

Minor 5ss

35.9

-1.6

2.7

38.5

39.5

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312