Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_140684444_140690753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140684444 - 140690753

Intron Length:

6310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCTA

5'SS Class:

major

3'SS Sequence:

TTGCCACTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATGA

Flanking Amino Acid:

APNIAVTLKKIPGEALIPDG

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

62.6

43.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.1

0.59

0.9

66.5

39.7

Minor 5ss

33.3

-1.9

3.6

47.7

47.8

Minor BPS

51.8

0.05

1.9

65.86

41.5

Associated Gene:

Gene:

FLT1

Ensembl Gene ID:

ENSAPLG00000006689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027530

140607629 - 140714774

107146

ENSAPLT00000007133

140608728 - 140714774

106047