Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_14071708_14090086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14071708 - 14090086

Intron Length:

18379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

GTAATCACTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTTTCAATAATT

Flanking Amino Acid:

QLYGVKSEQLLSTQGDASQV

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

81.8

Major BPS

84.4

0.85

34.5

Major PPT

67.8

0.4

59.8

41.2

Minor 5ss

-1.1

2.9

57.3

41.2

Minor BPS

0.45

1.9

83.41

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312