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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140750628_140751367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140750628 - 140751367

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TATTTCTAAAAA

Flanking Amino Acid:

SHPLELSEKNFQLNQDKTNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

1.2

80.7

33.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.47

1.1

68.8

42.1

Minor 5ss

37.4

-1.4

2.6

43.1

36.9

Minor BPS

61.8

0.37

1.7

73.45

38.1

Associated Gene:

Gene:

POMP

Ensembl Gene ID:

ENSAPLG00000008213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048351

140749146 - 140755632

6487

ENSAPLT00000008520

140714795 - 140755632

40838