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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14090187_14092067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14090187 - 14092067

Intron Length:

1881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTAATTAAGA

Flanking Amino Acid:

ELDSIIKTIASELNVAAVDP

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

85.3

0.79

0.8

76.9

37.3

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

0.09

2.1

70.69

40.9

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312