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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14095908_14109061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14095908 - 14109061

Intron Length:

13154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGCTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TTTGCTTTGAAA

Flanking Amino Acid:

HVCFIEEIVKDGQSDILYKF

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

74.8

0.62

39.8

Major PPT

71.2

0.48

0.9

69.4

35.6

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

64.3

0.44

1.5

75.09

36.4

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312