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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141051448_141057946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141051448 - 141057946

Intron Length:

6499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTGTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

CACTCACTGACT

Flanking Amino Acid:

VEIAKIRDEVALNTARWKKL

Intron Amino Acid Position:

1093

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

64.9

0.37

29.8

Major PPT

68.9

0.42

65.2

41.2

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

48.2

-0

66.14

44.2

Associated Gene:

Gene:

MTUS2

Ensembl Gene ID:

ENSAPLG00000008305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038273

141045926 - 141071629

25704

ENSAPLT00000008638

140806385 - 141071629

265245