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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141058162_141063186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141058162 - 141063186

Intron Length:

5025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GTCGTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

GTCGTTGCAACA

Flanking Amino Acid:

ERVKSQHQHQVADITAAHDA

Intron Amino Acid Position:

1165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

63.8

0.31

1.1

57.9

42.1

Minor 5ss

36.9

-1.5

2.7

45.6

42.5

Minor BPS

41.6

-0.6

2.1

50.9

41.3

Associated Gene:

Gene:

MTUS2

Ensembl Gene ID:

ENSAPLG00000008305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038273

141045926 - 141071629

25704

ENSAPLT00000008638

140806385 - 141071629

265245