Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_141081529_141083712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141081529 - 141083712

Intron Length:

2184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

TTTGTCTCACTT

Flanking Amino Acid:

SLVAACVLVLRYQPEQPNLA

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

62.2

0.3

1.1

68.9

Major PPT

78.1

0.63

0.7

32.6

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

51.4

0.12

1.9

75.15

42.4

Associated Gene:

Gene:

SLC7A1

Ensembl Gene ID:

ENSAPLG00000008545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008911

141078689 - 141099000

20312

ENSAPLT00000027633

141078689 - 141099233

20545