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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14109351_14111132_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14109351 - 14111132

Intron Length:

1782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATAC

5'SS Class:

strong_major

3'SS Sequence:

AAAACACATATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGTTTTTAAAA

Flanking Amino Acid:

LTQPSQTVARGGPGRAAMPT

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.8

30.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

50.3

0.01

41.3

37.7

Minor 5ss

44.3

-0.6

2.8

58.5

46.3

Minor BPS

64.3

0.44

1.4

68.67

37.7

Associated Gene:

Gene:

COG5

Ensembl Gene ID:

ENSAPLG00000007291

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007581

14056139 - 14230123

173985

ENSAPLT00000007578

14048812 - 14230123

181312