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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141241086_141245832_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

141241086 - 141245832

Intron Length:

4747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTTTGGAAC

5'SS Class:

weak_major

3'SS Sequence:

AGTGCCAGATTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGGTAAA

U12 Branch Point Sequence:

AGTGCCAGATTA

Flanking Amino Acid:

KRIYIPLPTGTTSEALAGLT

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.8

0.09

1.4

57.8

41.1

Major BPS

46.9

-0.1

1.4

47.4

44.6

Major PPT

49.5

-0

45.9

40.8

Minor 5ss

36.4

-1.5

2.9

43.2

37.5

Minor BPS

42.3

-0.5

1.9

52.53

39.4

Associated Gene:

Gene:

KATNAL1

Ensembl Gene ID:

ENSAPLG00000003805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028687

141240752 - 141261096

20345

ENSAPLT00000003902

141240752 - 141270729

29978