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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141252809_141260626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141252809 - 141260626

Intron Length:

7818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

GTGACTTTCACT

Flanking Amino Acid:

EPRARGRDDKGKKIPQEGVG

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

77.7

0.69

30.2

Major PPT

78.9

0.65

0.8

70.6

35.1

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

56.8

0.29

1.8

73.14

43.8

Associated Gene:

Gene:

KATNAL1

Ensembl Gene ID:

ENSAPLG00000003805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028687

141240752 - 141261096

20345

ENSAPLT00000003902

141240752 - 141270729

29978