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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141406209_141407477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141406209 - 141407477

Intron Length:

1269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGTTT

5'SS Class:

major

3'SS Sequence:

TGTGTGTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

CMRCGYKHQDRCRKTLTTFT

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

75.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

78.7

0.65

69.2

46.1

Minor 5ss

37.7

-1.4

3.5

56.2

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

USPL1

Ensembl Gene ID:

ENSAPLG00000003991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048164

141404584 - 141411533

6950

ENSAPLT00000004085

141401500 - 141411533

10034