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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141407604_141407851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141407604 - 141407851

Intron Length:

248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTTTCTTTATT

Flanking Amino Acid:

RSQRRRMILEKIPSILMIHF

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.2

0.48

0.9

70.6

34.8

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

69.3

0.69

1.6

84.19

36.4

Associated Gene:

Gene:

USPL1

Ensembl Gene ID:

ENSAPLG00000003991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048164

141404584 - 141411533

6950

ENSAPLT00000004085

141401500 - 141411533

10034