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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141489210_141489758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141489210 - 141489758

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTACTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTCCTCTTACTC

Flanking Amino Acid:

RSSEIKAKLQELNNVCEPIV

Intron Amino Acid Position:

791

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

83.9

0.76

0.8

80.9

30.9

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

57.8

0.23

1.6

66.76

39.6

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259