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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141491372_141491889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141491372 - 141491889

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TATTGACACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTATATTGACA

Flanking Amino Acid:

GPYEKFVCEKDLQSFSALLT

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

66.2

0.36

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

62.1

0.38

1.6

76.14

34.2

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259