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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141494455_141496629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141494455 - 141496629

Intron Length:

2175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATTCTTTTGATT

Flanking Amino Acid:

IGVPYPETKIGRYVIQNVAA

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.1

0.72

0.8

74.4

40.4

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

64.9

0.55

1.1

77.76

32.2

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259