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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141496764_141498112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141496764 - 141498112

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTAGC

5'SS Class:

major

3'SS Sequence:

TCCCTAATCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TTTTCCCTAATC

Flanking Amino Acid:

LWNTEAEDTEGVHEVFSRNH

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

67.1

44.6

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

67.5

0.39

0.8

61.7

32.4

Minor 5ss

34.2

-1.8

36.5

40.8

Minor BPS

77.1

0.83

1.6

87.3

29.2

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259