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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141499375_141500199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141499375 - 141500199

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

GTGTGGTTGACA

Flanking Amino Acid:

NDTDVSGKMNRSQFEELCAD

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

67.6

0.44

1.2

Major PPT

87.8

0.85

0.6

88.4

21.1

Minor 5ss

-1

56.7

47.6

Minor BPS

-0.2

2.4

62.71

43.8

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259