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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141501010_141504197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141501010 - 141504197

Intron Length:

3188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

GTTACATTGATA

Flanking Amino Acid:

CLRLMNDMTAVALNYGIYKQ

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.93

0.8

83.5

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

1.1

0.4

13.8

Minor 5ss

39.5

-1.2

2.8

48.4

41.7

Minor BPS

57.9

0.24

1.6

69.35

36.4

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259