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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141504298_141505310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141504298 - 141505310

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTGCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTATTACTAACT

Flanking Amino Acid:

KKPVTDCVISVPSFFTDAER

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.7

0.74

0.8

80.6

31.4

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

53.6

0.19

1.9

75.75

40.1

Associated Gene:

Gene:

HSPH1

Ensembl Gene ID:

ENSAPLG00000005104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005327

141488585 - 141510843

22259