Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_141615361_141630729_F

Intron Information:

Intron Rank:

133376

Intron Class:

major

Intron Phase:

Intron Coordinates:

141615361 - 141630729

Intron Length:

15369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCACCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTCTTGTCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

68.9

0.43

0.8

66.7

28.1

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

47.4

-0.3

2.2

58.48

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026206

141615271 - 141631413

16143