Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_141850704_141852404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141850704 - 141852404

Intron Length:

1701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

TTTTTTCTATTT

Flanking Amino Acid:

FVKIIQFIAQERLDFAMKEI

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.7

37.6

Major BPS

0.45

57.8

Major PPT

86.9

0.83

0.7

86.2

26.5

Minor 5ss

35.9

-1.6

3.3

46.1

49.1

Minor BPS

54.8

0.23

1.9

79.65

37.1

Associated Gene:

Gene:

FRY

Ensembl Gene ID:

ENSAPLG00000006519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037869

141786354 - 141947171

160818

ENSAPLT00000035992

141756273 - 141947171

190899

ENSAPLT00000006897

141786354 - 141947171

160818