Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_141881059_141881412_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141881059 - 141881412

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACGTATC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTTCGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

GTCTCATTACAT

Flanking Amino Acid:

IYEISMQLMQILESKLFVYS

Intron Amino Acid Position:

1260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.9

90.1

Major BPS

73.9

0.59

30.2

Major PPT

76.7

0.6

0.8

72.6

32.1

Minor 5ss

28.9

-2.4

44.9

43.1

Minor BPS

49.9

0.07

71.29

Associated Gene:

Gene:

FRY

Ensembl Gene ID:

ENSAPLG00000006519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037869

141786354 - 141947171

160818

ENSAPLT00000035992

141756273 - 141947171

190899

ENSAPLT00000006897

141786354 - 141947171

160818