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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141889253_141891608_F


Intron Information:

Intron Rank:
34

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
141889253 - 141891608

Intron Length:
2356

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTGAC

5'SS Class:
major

3'SS Sequence:
CTTGTATTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTCTTGTATT

Flanking Amino Acid:
ENRIVKETDERFSNVIRAHT

Intron Amino Acid Position:
1538

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1.2
69.6
34.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
71.6
0.49
1.1
71.8
37.4

Minor 5ss
35.4
-1.7
3
43.7
44.1

Minor BPS
62.7
0.48
1.8
84.45
36.2

Associated Gene:

Gene:
FRY

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

141786354 - 141947171
160818

141756273 - 141947171
190899

141786354 - 141947171
160818