Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_141894961_141895547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141894961 - 141895547

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTCAATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TGTGATTCAATT

Flanking Amino Acid:

ETITPRGPLHRCNIAVIFMT

Intron Amino Acid Position:

1616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

0.57

1.2

77.7

37.1

Major PPT

76.8

0.6

0.9

66.7

43.3

Minor 5ss

35.7

-1.6

48.8

Minor BPS

49.5

0.04

1.8

69.73

41.6

Associated Gene:

Gene:

FRY

Ensembl Gene ID:

ENSAPLG00000006519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035992

141756273 - 141947171

190899

ENSAPLT00000006897

141786354 - 141947171

160818

ENSAPLT00000037869

141786354 - 141947171

160818