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Intron Name: Anas_platyrhynchos_platyrhynchos_1_141900963_141901587_F


Intron Information:

Intron Rank:
39

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
141900963 - 141901587

Intron Length:
625

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGGAG

5'SS Class:
major

3'SS Sequence:
GTATTTCTTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTTAT

U12 Branch Point Sequence:
TATTTCTTTAAG

Flanking Amino Acid:
ANKLIEFLTTRAFGPLWCHE

Intron Amino Acid Position:
1779

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.67
1
65.9
39.9

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
72.5
0.51
1.1
76.1
38

Minor 5ss
28.6
-2.4
3.5
37.4
47.3

Minor BPS
56.9
0.07
1.8
65.42
42.2

Associated Gene:

Gene:
FRY

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

141786354 - 141947171
160818

141756273 - 141947171
190899

141786354 - 141947171
160818